Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNEIQILNNGYPMPSVGLGVYKISDEDMTKVVNAAIDAGYRAFDTAYFYDNEASLGRALKDN----GVDREDLFITTKLWNDYQGYEKTFEYFNKSIENLQTDYLDLFLIHWP------------------CEADGLFLETYKAMEELYEQGKVKAIGVCNFNVHHLEKLMAQSSIK--PMVNQIEVHPYFNQQELQEFCDRHDIKVTAWMPL---------MRNRGLLDNPVIVKIAEKYHKTPAQVVLRWHLAHNRIIIPKSQTPKRIQENIDILDFNLELTEVAEIDALDRNARQGKNPDDVKIGDLK |
| 4JII Chain:X ((9-299)) | -------LSTKAKMPIVGLGTWKSPLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATILSFNRNWR-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153886 for 2139 contacts (-71.9/contact) +
2D Compatibility (PS) -27975 + (NN) -10627 + (LL) 1028
1D Compatibility (HY) -25200 + (ID) 5800
Total energy: -222460.0 ( -104.00 by residue)
QMean score : 0.547
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