Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVI-CAPAIQLDALTTAVKEGKAQGLEI--GAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK |
4MVA Chain:B ((25-274)) | MRHPLVMGNWKLNGSRHMVHELVSNL-----RKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDAN-IAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71107 for 2083 contacts (-34.1/contact) +
2D Compatibility (PS) -26847 + (NN) -10109 + (LL) -24
1D Compatibility (HY) -18000 + (ID) 5450
Total energy: -131537.0 ( -63.15 by residue)
QMean score : 0.478
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