Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVI-CAPAIQLDALTTAVKEGKAQGLEI--GAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK
4MVA Chain:B ((25-274))MRHPLVMGNWKLNGSRHMVHELVSNL-----RKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDAN-IAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE


General information:
TITO was launched using:
RESULT:

Template: 4MVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71107 for 2083 contacts (-34.1/contact) +
2D Compatibility (PS) -26847 + (NN) -10109 + (LL) -24
1D Compatibility (HY) -18000 + (ID) 5450
Total energy: -131537.0 ( -63.15 by residue)
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_4MVA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MVA-query.scw
PDB file : Tito_Scwrl_4MVA.pdb: