Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSKYEPLFDKVELPNGVELRNRFVLAPLTHISSNDDGTISDVELPYIEKRSQ-DVGITINAASNVSDVGKAFPGQPSIAHDSDIEGLKRLATAMKKNGAKALVQIHHGGAQALPELI-PDGDVVAPSPISLKSF------GQKQEHSAREMTNEEIEQAIKDFGEATRRAIEAGFDGVEIHGANHYLIHQFVSPYYNRRNDVWAN----QYKFPVAVIEEVLKAKEAYGNKDFIVGYRLSPEEA-ESPGI--TMEITEELVNKISHMPIDYIHVSMMDTHATTREGKYAGQE-RLPLIHKWINGRMPLIGIGSIFTADEALDAVENVGVDLVAIGRELLLDYQFVEKIKDGREDEIINYFDPEREDNHHLTPNLWHQFNEGFYPLPRKDK |
| 1ICP Chain:A ((11-373)) | --VDKIPLMSPCKM-GKFELCHRVVLAPLTRQRS-YGYIPQPHAILHYSQRSTNG-GLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEI----GS-DRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKT---------CTESLVPMRKAY--KGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFISNPDLPKRFELNAP--LNKY----NRDTFYTSDPIVGYTDYPFLE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ICP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144107 for 3061 contacts (-47.1/contact) +
2D Compatibility (PS) -36623 + (NN) -19315 + (LL) 716
1D Compatibility (HY) -18800 + (ID) 4400
Total energy: -222529.0 ( -72.70 by residue)
QMean score : 0.570
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