Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRQARPEDRFDIAKLVYMVWDDMELELVK-HLPKDMVLDAIEKSCVDATYRTFYQHILVYEVENKVAGCIISYSGENELKYEKAWELLDLPEEIKQYGTPLPVKEAKDDEYYIETIATFAAYRGRGIATKLLTSLLES-NTHVKWSLNCDINNEAALKLYKKVGFISDGQIELYKHMYHHLIVK
3EXN Chain:A ((13-149))
DLAPVTPKDAPLLHRVFHLSPS-YFALIGMELPTLEDVVRDLQTLEVD-----PRRRAFLLFLGQEPVGYLDAKLGYP-----------------------------EAEDATLSLLLIREDHQGRGLGRQALERFAAGLDGVRRLYAVVYGHNPKAKAFFQAQGFRYVKDG-------------
General information:
TITO was launched using:
RESULT:
Template:
3EXN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82522 for 923 contacts (-89.4/contact) +
2D Compatibility (PS) -14806 + (NN) -8019 + (LL) 4156
1D Compatibility (HY) 800 + (ID) 750
Total energy: -101141.0 ( -109.58 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_3EXN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EXN-query.scw
PDB file :
Tito_Scwrl_3EXN.pdb
: