Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLLYEGKAKRIFSTNQENELRVEYKDEVTAGNGAKKDTMAGKGRLNNQITSIIFKYLQENGIESHFIKQLSETEQLVKPVKIIPLEVVVRNIASGSITKRLGFENGEVFREPLVEFFYKNDALNDPLITDDHVKLLNIASDEDIEILKSKALKINNVLKQLMDAMNLKLVDFKIEFGKTETGQILLADEISPDTCRIWDKATNANFDKDVYRNNTGSLIETYQIFLNKLEDLK
2Z02 Chain:A ((11-242))
KQPLYSGKAKSIYEID-DDKVLIEFRDDITAGNGAKHDVKQGKGYLNALISSKLFEALEENGVKTHYIKYIEPRYMIAKKVEIIPIEVIVRNIAAGSLCRRYPFEEGKELPFPIVQFDYKNDEYGDPMLNEDIAVALGLATREELNKIKEIALKVNEVLKKLFDEKGIILVDFKIEIGKDREGNLLVADEISPDTMRLWDKETRDVLDKDVFRKDLGDVIAKYRIVAERLGLL-
General information:
TITO was launched using:
RESULT:
Template:
2Z02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72245 for 1832 contacts (-39.4/contact) +
2D Compatibility (PS) -24587 + (NN) -4651 + (LL) 184
1D Compatibility (HY) -22800 + (ID) 5400
Total energy: -129499.0 ( -70.69 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_2Z02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z02-query.scw
PDB file :
Tito_Scwrl_2Z02.pdb
: