Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQSKVFIPTMRDVPSEAEAQSHRLLLKS-GLIK--Q-STSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQD-RHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRP-RFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGIN-ARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHSTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKA-QPLIM-GCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNT-KFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKR-ASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK |
| 1NYR Chain:A ((237-641)) | ----------------ERKERDHRKIGKELELFTNSQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHHMMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPD-QIKEEFKRVVNMIIDVYKDFGFEDYSFRLSYRDPED--------------KEKYF-----DDDDMWNKAEN--------------------------------------MLKEAA------------------------DELG---L------SYEEAIG-EAAFYGPKL-------------------------DVQVKT-AMGKEET---------------L----STAQ--------LDFLLPER----FDLTYIGQDGEHHRPVVIHRGVVSTMERFVAFLTEET----KGAFPTWLAPKQVQIIPVNVD--LHYDYARQLQDELKSQGVRVSIDDRNEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRL-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -156130 for 3174 contacts (-49.2/contact) +
2D Compatibility (PS) -42511 + (NN) -10871 + (LL) 10124
1D Compatibility (HY) -20800 + (ID) 3950
Total energy: -224138.0 ( -70.62 by residue)
QMean score : 0.494
|
|
|