Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYTITNVERRSKYIVFQL-DNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVASVASYPSFLE--IAPEPFTNEALTYYLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYKQP--VCKVCGSQIETKIIATRNSHYCPVCQK |
4PDI Chain:A ((1-270)) | -PELPEVETVRRELEKRIVGQKI---------ISIEATYPRMVLTGFE--QLKKELTGKTIQGISRRGKYLIFEIGDDFR----LISHLRMEGKY----RLATLDAPR-EKHDHLTMKFA-DGQLIYADVRKFGTWELISTDQVLPYFLKKKIGPEP-TYEDFDEKLFR-EKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSSIR----ALGSTGKMQNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPVCQQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78813 for 2120 contacts (-37.2/contact) +
2D Compatibility (PS) -27167 + (NN) -2564 + (LL) 2472
1D Compatibility (HY) -21600 + (ID) 5200
Total energy: -132872.0 ( -62.68 by residue)
QMean score : 0.304
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