Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIGDISIHYLNGGNTKMDGGAMFGVVPKPLWSKQYNANERNQINLPTHPILIQTAQYNLIIDAGIGNGKLSEKQL----------RNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGHAIFENAIHVVQQDEWHEFIAPNIRSKSTYWDKNKGDYSNKLILFEKHFEPVPGIKMQHSGGHSFGHTIITIESQ-GDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKERMIPYFIQQQYWFLFYHDENYFAVKYSDDGENIDAYILRETLVDNN |
3DHA Chain:A ((3-244)) | ISMTVKKLYFIPAGRCMLDHSSVNSALT-----------PGKLLNLPVWCYLLETEEGPILVDTGMPESAV-NNEGLFNGTFVEGQILPKMTEEDRIVNILKRVGYEPDDLLYIISSHLHFDHAGGNGA------FTNTPIIVQRTEYEAALHREE-----YMKECILPH-LNYKIIEGDYEVVPGVQLLYTPGHSPGHQSLFIETEQSGSVLLTIDASYTKENFEDEV-PFAGFDPELALSSIKRLKEVVKKEKPIIFFGHDIEQE------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DHA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86060 for 2010 contacts (-42.8/contact) +
2D Compatibility (PS) -24661 + (NN) -7108 + (LL) 2564
1D Compatibility (HY) -11200 + (ID) 2400
Total energy: -128865.0 ( -64.11 by residue)
QMean score : 0.364
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