Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEVKTFYNGNTMPQIGLGTFRV--ENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGTNEAVMVDTWKGMEDLYKNNKAKNIGVSNFEPEHLEALLAQVSIKPVINQVEYHPYLTQHKLKLYLAAQHIVMESWSPLMNAQ--ILNDETIKDIAQELGKSPAQVVLRWNVQHGVVIIPKSVTPNRISENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKTFEG
1VP5 Chain:B ((19-276))----TLNNGVEMPILGYGVFQIPPEKTEEC---VYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFGDVHC---AWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQRQEEIEFMRNYNIQPEAWGPFAEGRKNIFQNGVLRSIAEKYGKTVAQVILRWLTQKGIVAIPKTVRRERMKENISIFDFELTQEDMEKIATLDE-------------


General information:
TITO was launched using:
RESULT:

Template: 1VP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105543 for 2191 contacts (-48.2/contact) +
2D Compatibility (PS) -27451 + (NN) -11549 + (LL) 1120
1D Compatibility (HY) -25200 + (ID) 5400
Total energy: -174023.0 ( -79.43 by residue)
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_1VP5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VP5-query.scw
PDB file : Tito_Scwrl_1VP5.pdb: