Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MKKTLLASSLAVGLGIVAGNAGHEAHASEADLN---KASLAQMAQSND-QTLNQKPIEAGAYNYTFDY-EGFTYHFESDGTHFAWNYHATGANGANMSAQAPATNNVE--PSAVQANQVQSQEVEAPQNAQTQQP----QASTSNNSQVTATPTESKASEGSSVNVNAHLKQIAQRESGGNIHAVNPTSGAAGKYQFLQ----STWDSVAPAKYKGVSPANAPESVQDAAAVKLYNTGGAGHWVTA |
| 2W1N Chain:A ((10-237)) | AEVTGSVSLEALEEVQVGENIEVGVGIDELV-NAEAFAYDFTLNYDENAFEYVEAISDDGVFVNAKKIEDGKVRVLVSSLTGEPLPAKEVLAKVVLRAEAK-TEGSNLSVTNSSVGDGEGLVHEIAGTEKTVNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTEG--------LEGYILYKDG---KKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYS-----NGEVSSKESLTLR-----------TA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W1N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 25877 for 1357 contacts (19.1/contact) +
2D Compatibility (PS) -20208 + (NN) 10233 + (LL) 536
1D Compatibility (HY) -5600 + (ID) 2400
Total energy: 8438.0 ( 6.22 by residue)
QMean score : 0.109
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