Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYETYHSGWIECITGSMFSGKSEELIRRLRRGIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISKASEIMTHNLTNVDVIGIDEVQFFDDEIVSIVEKLSADGHRVIVAGLDMDFRGEPFEPMPKLMAVSEQVTKLQAVCAVCGSSSSRTQRLINGKPAKIDDPIILVGANESYEPRCRAHHIVAPSDNNKEEL
2ORV Chain:B ((19-190))
-------GQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKD---------------MEALPACLLRDVAQEAL-GVAVIGIDEGQFFPD-IVEFCEAMANAGKTVIVAALDGTFQRKPFGAILNLVPLAESVVKLTAVCMECFREAAYTKRLGTEKEVEV------IGGADKYHSVCRLCYF-----------
General information:
TITO was launched using:
RESULT:
Template:
2ORV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91020 for 1287 contacts (-70.7/contact) +
2D Compatibility (PS) -17212 + (NN) -9277 + (LL) 1996
1D Compatibility (HY) -16000 + (ID) 3300
Total energy: -134813.0 ( -104.75 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_2ORV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ORV-query.scw
PDB file :
Tito_Scwrl_2ORV.pdb
: