Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYVENSYLSKQLCFLFYVSSKEIIKKYTNYLKEYDLTYTGYIVLMAIENDEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQGKAIKSPLAEISVKVFNEF-NISEREASDIINNLRNFVSKNFDYSDRK
2PEX Chain:A ((11-152))
-TDTLLQLDNQLSFALYSANLAMHKLYRGLLKALDLTYPQYLVMLVLWETDERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTR-------VIIALTETGRALRSKAGAVPEQVFC-ASACSLDELRQLKQELEKLRSSLGA-----
General information:
TITO was launched using:
RESULT:
Template:
2PEX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66969 for 823 contacts (-81.4/contact) +
2D Compatibility (PS) -14033 + (NN) -3906 + (LL) 784
1D Compatibility (HY) -10000 + (ID) 2300
Total energy: -96424.0 ( -117.16 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_2PEX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PEX-query.scw
PDB file :
Tito_Scwrl_2PEX.pdb
: