Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MNILFGISDTQECYNAIKFAVKLAHSLKEVRFTLLHVSMEVFIYSESGMMDYGQTEALEEEKAKALLKQFEDAFKKENIECESVLKSGDLIDVVLDMAKDY--DLLLIGASESNLLYRLFI-SHQNSLVEQSSIPVVIAK----
1MJH Chain:A ((3-162))
VMYKKILYPTDFSETAEIALKHVKAFKTL-KAEEVILLHVIDEREI---KVEEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVKRKNS
General information:
TITO was launched using:
RESULT:
Template:
1MJH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88070 for 944 contacts (-93.3/contact) +
2D Compatibility (PS) -14564 + (NN) -4212 + (LL) 344
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -112152.0 ( -118.81 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_1MJH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MJH-query.scw
PDB file :
Tito_Scwrl_1MJH.pdb
: