Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKWIKGAVVFVGGFATITTFSLIYHQKPKAPLNNQPSLLNDDEVKYPLQDYTFTQNPQPTNTESSKDATIKALQEQLKAALKALNSK-EMNYSKEETFTSPPMDPKTTPPKKDFSPKQLDLLASR-ITPFKQSPKNYEENLIFPVDNPNGIDSFTNLKEKDIATNENKLLRTITADKMIPAFLITPISSQIAGKVIAQVESDIFASMGKAVLIPKGSKVIGYYSNNNKMGEYRLDIVWSRIITPHGINIMLTNAKGADIKGYNGLVGELIERNFQRYGVPLLLSTLTNGLLIGITSALNNRGNKEEVTNFFGDYLLLQLMRQSGMGINQVVNQILRDKSKI-APIVVIREGSRVFISPNTDIFFPIPRENEVIAEFLK |
| 3FSY Chain:A ((6-312)) | ------VTGAAGIGLATLAADGSVLDTWF----------------------------PAPELTESGTSATSRLAVSDVPVELAALIGRDDDRRTETIAVRTVIGSLDDVAADPYDAYLRLHLLSHRLVAPHGLNAGGLFGVLTNVVWTNHGPCAIDGFEAVRARLRRRGPVTVYGVDKFPRMVDYVVPTG-------VRIADADRVRLG--AHLAPGTTVMHEGFVNYNAGTLGASMVEGRI--SAGVVV----GDGSDVGGGASIMGTLSTHVI----------SIGKRCLLGANSGLGIS---------LGDDCVVE----AGLYVTAGTRVTMPDSNSVKARELSGSSNLLFRRNSVSGAVEVLARDGQGIAL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FSY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25455 for 2523 contacts (-10.1/contact) +
2D Compatibility (PS) -31526 + (NN) -2908 + (LL) 5232
1D Compatibility (HY) -4400 + (ID) 2450
Total energy: -61507.0 ( -24.38 by residue)
QMean score : 0.156
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