Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEIILITGAYGMVGQNTALYFKKNKPDV--TLLTP---------------------KKSELYLLDKDNVQAYLKEYKPTGIIHCAGRVGGIVANMNDLSTYMVENLLMGLYLFSSALDL---------GVKKAINLASSCAYPKYAPN----------PLKESDLLNGSLEPTNEGYALAKLSVMKYCEYVSAEKGVFYKTLVPCNLYGEFDKFEEKIAHMIPGLIARMHTAKLKNEKNFAMWGDGTARREYLNAKDLARFIALAYENIAQMPSVMNVGSGVDYSIEEYYEKVAQVLDYKGV--------FVKDSSKPVGMQQKLMDISKQK-ALKWELEIPLEQGIKEAYEYYLKLLEV |
1KEW Chain:A ((1-339)) | --MKILITGGAGFIGSAVVRHIIKN---TQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSI-TGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT----AYAPSS-PYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP----EKLIPLVILNA---LE--GKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG-KAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KEW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162814 for 2467 contacts (-66.0/contact) +
2D Compatibility (PS) -30489 + (NN) -10585 + (LL) 1232
1D Compatibility (HY) -6000 + (ID) 2700
Total energy: -211356.0 ( -85.67 by residue)
QMean score : 0.462
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