Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MQNLLIQAENAIALLFLL----NDKNLKGKIDLIYIDPPFATNNHFTITNGRATTISNSK-NGDIAYSDKVVGMDFMEFLKQRLVLLKELLSEQG---SIYVHTDYKIGHYVKVMLDEIFGIQNFRNE---------------ITRIKC-----NPKNFKRIGYGN------------------IKDMILFYSKGKNPIFNEPKIPYTPQDLEKR------FPKIDKDKRRYTTVPIHAPGEVESGECSKAFKGMLPPKG--RHWRTDIATLERWDKE-GLIEYSNNNNPRKKIYALEQVGKRVQDIWEFKDPQ-YPSYPTEKNAQLLDLIIKTSSNKDSIVLDCFCGSGTTLKSAFLLQRKFIGIDNSDLAIQACKNKLETITKDLFVSQNFYDFLVF |
| 1Q9J Chain:A ((1-418)) | MFPGSVIRKLSHSEEVFAQYEVFTSMTIQLRGVIDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVIDAELRLD----QSVSLLHLQLILREGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKAERFMSVMYAYPGLPQAVPVTRLWLSKQQTSDLMAFGREHRLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPNTDIVDLASDIVATLRADLANGVIQQSGLH----FGTAFEGTPPGLPPLVFCTDATSFPTMRTPPGLEIEDIKGQFYCSI-SVPLDLY--SCAVYAGQLIIEHHG-HIAEPGKSLEAIRSLLCTVPSEYG----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3387 for 2423 contacts (-1.4/contact) +
2D Compatibility (PS) -33406 + (NN) -2386 + (LL) 1516
1D Compatibility (HY) -12400 + (ID) 2800
Total energy: -52863.0 ( -21.82 by residue)
QMean score : 0.184
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