Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQKIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVH-----SKERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFLEKSAHTSAKFLKSMVDEL
4F1W Chain:A ((18-245))--KIGIIGAMEEEVTLLRDKID-NRQTITLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLASTLKVGDIVVSDETRYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAESCIRELNLNAVRGLIVSGDAFINGSVGLAKIRHNFP----DAVAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSTLMVETLVQKL


General information:
TITO was launched using:
RESULT:

Template: 4F1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147891 for 1933 contacts (-76.5/contact) +
2D Compatibility (PS) -23720 + (NN) -5133 + (LL) 920
1D Compatibility (HY) -15600 + (ID) 4000
Total energy: -195424.0 ( -101.10 by residue)
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_4F1W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F1W-query.scw
PDB file : Tito_Scwrl_4F1W.pdb: