Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKENLPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLISTIQNALNNLTTPIDVLTITANGEPTLYPHLL-ELIQSIKPFLKGVKTLILSNGSL-FYEPKVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILSFSQIYQGQLVAEVLLIKGVNDSANNLKLIADFLKKI-NTARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSLPKRSTAQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFKHLETLLNHKQITIKKVGSLEFYCAF |
| 3C8F Chain:A ((1-245)) | ----SVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHG-GKEVTVEDLMKEVVTYRHFMNASGGGVTASG-GEAILQAEFVRDWFRACKK--EGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKNV----KVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEE-----------------------------------------YKLDGVKPP---KKETMERVKGILEQYGHKVMF---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86195 for 1976 contacts (-43.6/contact) +
2D Compatibility (PS) -26194 + (NN) -14003 + (LL) 6064
1D Compatibility (HY) -12400 + (ID) 1700
Total energy: -134428.0 ( -68.03 by residue)
QMean score : 0.389
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