Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKRILFFLAATTFLLRAETASATINTTVDPNVMFSESSTGNVKKDRKRVLKSMVDLEKERVKNFNQYSETKMSKGDLSAFGAFFKGSLEDCVEQKICYYEHRNGKVSFVVNDREKFYKH-VLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKTQNSSNPDLDPMTNANTLKETASKEPETS-SKKEKKPKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK-- |
| 3C2B Chain:A ((14-216)) | SPRQNAVLDQALRLLVEGGEKAL-----------------------------TTSGLARAA----------NCSKESLYKWF-----------------------------GDRDGLLAAMITFQQSKVRTFEKAG---DRVSAPQLADHLEVFAHDLLDVL-------AGDVSLALNRLAIGQASRKLGDLLLER------GRRQIDRRARGLIEAGRRSGYLRFD-DAEEAYRSFYGLIVSDLHVRMLLGEAPDKD-----FSARAKKAVVAFLTLYGTEKVHSELGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 77980 for 1416 contacts (55.1/contact) +
2D Compatibility (PS) -20628 + (NN) -6490 + (LL) 6444
1D Compatibility (HY) -4000 + (ID) 950
Total energy: 52356.0 ( 36.97 by residue)
QMean score : 0.301
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