Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRISLLAVILALLFVACHETKKQILQNEADSTPSEKTIWQPEQK
3TBM Chain:A ((40-53))
----------QAWLCRCGHSLNKPFCDGSHKRVEFDSNL-----
General information:
TITO was launched using:
RESULT:
Template:
3TBM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1948 for 43 contacts (-45.3/contact) +
2D Compatibility (PS) -1426 + (NN) 670 + (LL) 2016
1D Compatibility (HY) -800 + (ID) 50
Total energy: -1538.0 ( -35.77 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_3TBM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TBM-query.scw
PDB file :
Tito_Scwrl_3TBM.pdb
: