Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQRTLSIIKPDALKKKVVGKIIDRFESNGLEVVAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKDAVAKNRELMGATDPKLAQKGTIRADFAESIDANAVHGSDSLENAHNEIAFFFAAREF
4DUT Chain:B ((8-137))
--ERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVAARMAHLSRADAEKFYA--------KDLVEFMISGPVMIQVLEGEDAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETARVEIAFFFPEMNV
General information:
TITO was launched using:
RESULT:
Template:
4DUT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54934 for 940 contacts (-58.4/contact) +
2D Compatibility (PS) -12690 + (NN) 837 + (LL) 948
1D Compatibility (HY) -12000 + (ID) 4300
Total energy: -82139.0 ( -87.38 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_4DUT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DUT-query.scw
PDB file :
Tito_Scwrl_4DUT.pdb
: