Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSKLFAPTLKEPPKDAVLKSPKHPGKA-GYIYQ-IGSGIYNFLPLAKKVLDKIENVTHKRMQEHGAQNILMSFVVLASLWEKSGRLDKYGKELLVFKDRK----DNDFVLSPTLEENITEIAANFIKSYKQLPVHLYQIHTKFRDEIRPRFGLVRAREFIMKDGYSFHEDAESLDKEFLNTQSAYKEILSDLG-LDFRIVEADSGAIGGSKSREFVVLTECGEDTIVVCQNCDYAANIEIAKRSKRTEPLMSPSALAKFPTPNTTSAPSVAEFFKTEPYFVLKALVNKVIHKDKETLACFFVRGDDNLEETKALNTLNLLGANALELREANEEDLNKAGLIAGFIGPYGLKKHVCYIIFDEDLKEGDCLIVGANEKDFHAVGVDLKGFENLVYADIVQVKESDCCPNCQGALKYHKSLEVGHIFKLGQSYAKSLKASFLDKNGKERFFEMGCYGIGISRLLSVILEQKSDDLGCVWTKNTAPFDVVIVVSNLKD--EAQKKLAFEVYERLLQKGVDALLDDRD-ARFGAKMRDFELIGERLALIVGKQTLESKEFECIKRANLEKQTIKDIELEEKILEMLASE |
| 1HC7 Chain:A ((13-386)) | -----------------DFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFL--------FSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMR-TRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAAIPVIE--------G--------------L-----KT---------------------EKEK------------------------------------------------------------FAG------------------------AVYTTT-----IEAL------------------------------------------------------MKDGKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHTTSWGLS-WRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRLGG-KETLPLAALPEALPGKLDAF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HC7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163776 for 2828 contacts (-57.9/contact) +
2D Compatibility (PS) -38186 + (NN) -6519 + (LL) 13976
1D Compatibility (HY) -15200 + (ID) 4050
Total energy: -213755.0 ( -75.59 by residue)
QMean score : 0.453
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