Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MADVVVGIQWGDEGKGKIVDRIAKDYDFVVRYQGGHNAGHTIV-HKGVKHSLHLMPSGVLYPKCKNIISSAVVVSVKDLCEEISAFE----DLENRLFISDRAHVILPYHAKKDAFKEKS---QNIGTTKKGIGPCYEDKMARSGIRMGDLLDDKILEEKLNAHFKAIEPFKKAY---DLGENYEKDLMGYFKTYAPKICPFIKDTTSMLIEANQKGEKILLEGAQGTLLDIDLGTYPFVTSSNTTSASACVSTGLNPKAINEVIGITKAYSTRVGNGPFPSEDTTPMGDHLRTKGVEFGTTTKRPRRCGWLDLVALKYACALNGCTQLALMKLDVLDGIDAIKVCVAYERK-GERLEAFP---SDLKDCTPIYQTFKGWEKSV-GVRKLDDLEPNAREYIRFIEKEVGVKIGLISTSPEREDTIFL------ |
| 1QF5 Chain:A ((1-431)) | GNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLVIN-GEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSEACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAEKLKEVMEYHNFQLVNYYKAEAV--DYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDFVMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGAGPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLDVLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGLPQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194181 for 3607 contacts (-53.8/contact) +
2D Compatibility (PS) -43805 + (NN) -8730 + (LL) 88
1D Compatibility (HY) -32400 + (ID) 9450
Total energy: -288478.0 ( -79.98 by residue)
QMean score : 0.491
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