Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKQHIQYFKNLVGGEDFFTDLAHLNAYCYDATKERHLPSGVIFPKNEREISQILKYCNEHRLIVVPRGAGSGFTGGAL----SVSGGLVLSVEKHLDKILEIDTKNLIARVEPGVINKHFQNEVEKLDLFYPPDPASENQ-STLGGNVAENAGGMRAAKYGITKDYVMALRV------VLANGEIIRAGKKTIKDVAGFNI--------------------------------------AGLMIASEGCLG--VISEITLKLLAKPPLKQSAMGVFNHIEDAMNAVYKTMSS-GVTPVAMEFLDNLSIKAVEE-RFSKGLPKDAGAILITQVDGVVKEQIAWQLNEIEKHFKANGCVGFKIAQNEQEEQDLWFSRRNASQSISVYGKKKLNE-------DVTVPRASLPSLLQEVAKISQKYGFKIPCFGHTGDGNVHVNIMLEDPKRDLEKGHKAMEEIFQAAISLEGTLSGEHGIGLSKAKFMPLAFNHSEMELFRNIKKALDPNNILNP------FKMGL |
| 1F0X Chain:A ((9-567)) | --NKAFLNELARLVGSSHLLTDPAKTARYRKGFRSGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGKGE-QVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAELPPRMKNWRDKYEHHLLLKMAGDGVGEAKSWLVDYFKQAE-----GDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVEDILALDIALRRNDTEWYEHLPPEIDSQLVHKL-YYGHFMCYVFHQDYIVKKGV----DVHALKEQMLELLQQRGAQYPAEHNVG----------HLYKAPETLQKFYRENDPTNSMNPGIGKTSKRKNW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F0X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109679 for 3679 contacts (-29.8/contact) +
2D Compatibility (PS) -46958 + (NN) -11719 + (LL) 1804
1D Compatibility (HY) -4400 + (ID) 3950
Total energy: -174902.0 ( -47.54 by residue)
QMean score : 0.368
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