Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFEKWIGLTLLLSSLGYPCQKVSISFKQYENLIHIHQKG--CNNEVVCRTLISIALLESSLGLNNKREK-SLKDTSYSMFHITLNTAKKFYPTY----SKTLLKTKLLN-DVGFAIQLAKQILKENFDYYHQKHPNKSVYQLVEMAIGAYNGGMKHNPNGAYMKKFRCIYSQVRYNE |
2NWD Chain:X ((11-101)) | ---------------------------------TLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQGIRAWVAWRNRCQNRDVRQYVQGCGV------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11150 for 595 contacts (-18.7/contact) +
2D Compatibility (PS) -8312 + (NN) 2897 + (LL) 4356
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -16559.0 ( -27.83 by residue)
QMean score : 0.203
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