Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKATQSTINDFFALTGTIFSIPVYQRNYTWEEENCEKLLQDIVNISQNKKTHFMGSITYILHLIDDEKSLRQLQEFVIIDGQQRITTIMLLLKAIETKIQNEGIKKEIDGLLNLSGQRLRLKPIKSDKEAFDLVMQNRSHEIQGVSHIKNNYKFFTKELDNYISKGYRIEEIYGAFLWLKIVAIGLELGEDDPQVVFESINATGVQLKGLDLIRNYLMMGENSDNQNRLYNTYWVPLENWLGEKDLNDFIKTYLRIYFEDRVKEGEREVYYALKAHHRDNFPNNIQGLMSDMREYGRIFQIFLDRDHYFLHRGDPQQLANLRLRVKDLVKIKFGVAKPFVLRCARDFEEGKLDYENFHEILQILISYFVRRSVCGDSTPTLTRVLYSLYRQLGEDVSADALKRYLGKSVGQMAFPNDDKIKAAFLVRNAYAANQVCKFILLEIEKLSNAEPPKEENLEVEHFYPKTPTQEWRDRVGDYFTFEQ--DYLNNFGNLTLSGQNQRLGNKSYEAKIALMEEYSSLHLNDYFTNNTDSWGIEEVRARSEYLADQFCQVGLFKDLPKEYRARELHKTLDDNLTNHNLQSVKLPNDQRRMAGNAKELASVVIDYLLENAREAFESYTDDESQKYIYWSKAKAEARDRDGTLVVPFEKYGFYFVSNASYQTTGSNLKDLILGCNLNPRDFVVE
1PGJ Chain:B ((1-478))-SMDVGVVG--LGVMGANLALNIAEKGFK----------VAVFNRTYSKSEEFMKA-NASAPFAGNLKAFETMEAFAASLKKPR--KALILVQA------GAATDSTIEQLKKVF-------------EKGDILVDTG----------NAHFKDQGRRAQQLEAAG--------------LRFLGMGISGGEEGARKGPAFFPGGTLSVWEEIRPIVEAAAAKADDGR-------PCVTMNGSGGAGSCVKM-YHNSGEYAILQIWGEVFDILRA-MGLN-NDEVAAVLEDWKSKNFLKSYMLDISIAAARAKDKDG------------------------------------------------------------------------SYLTEHVMDRIGSKGTGLWSAQEALEIGVPAPSLNMAVVSRQFTM-----YKTERQANASNAPGITQSPGYTLKNKSPSGPEIKQLYDSVCIAIISCYAQMFQCLREMDKVH-------------------------------NFGLNLPATIATFRAGCILQGYLLKPMTEAFEKNPNISNLMC---AFQTEIRAGLQNYRDMVALITSKLEVSI-PVLSASLNYVTAMFTPTL------KYGQLVSLQRDVFGRHGYERVDKDGRESFQWP----ELQ----------------


General information:
TITO was launched using:
RESULT:

Template: 1PGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) 10512 for 3981 contacts (2.6/contact) +
2D Compatibility (PS) -49507 + (NN) -5661 + (LL) 16356
1D Compatibility (HY) -4800 + (ID) 3150
Total energy: -36250.0 ( -9.11 by residue)
QMean score : 0.181

(partial model without unconserved sides chains):
PDB file : Tito_1PGJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PGJ-query.scw
PDB file : Tito_Scwrl_1PGJ.pdb: