Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHHTPMNT------------PLKLSVQALERYFLGQLFEFDAPLDL------IGTFFQKQVWSALMT-IPYGKTKSYDEIAKLINNPKSCRAIGNANRNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNERAKNFLIS
1QNT Chain:A ((6-176))
-EMKRTTLDSP--L--GKLELSGCEQGLHEIKLLGKDAVE------VPAPAAVLGGPEPLMQCTAWLNAYFHQPEAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSGGLAVKEWLLAHEGHRL----------
General information:
TITO was launched using:
RESULT:
Template:
1QNT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87863 for 1064 contacts (-82.6/contact) +
2D Compatibility (PS) -15744 + (NN) -4189 + (LL) 1152
1D Compatibility (HY) -7600 + (ID) 2450
Total energy: -116694.0 ( -109.67 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_1QNT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QNT-query.scw
PDB file :
Tito_Scwrl_1QNT.pdb
: