Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVDSFNRVIDYIRVSVTKQCNFRCQYCMPTTPLDFFDDEELLPLDNVLEFLKIAIDEGVKKIRI--TGGEPLLRKGLDEFIAKLHAYNKEVALVLSTNGFSL-KKMAKGLKDAGLSRVNVSLDSLKSDRVLKISQKDALKNTLEGIEESLKVGLKLKLNTVVMKGVNDDEILELLEYAKNRSIQIRYIEFMENTHAKSLVKGLKEKEILDLIAQKYKIMGMEKPKQGSSKIYTLENGYQFGIIAPHSDDFCQSCNRIRLASDGKICPCLYYQDAIDAKEAIINKDTKMMKRLLKQSIINKPEKNMWNDKNGGTPTRAFYYTGG |
4M7T Chain:A ((21-270)) | -----MDKLFSMIEVEVNSQCNRTCWYCPNSVSKR--KETGEMDPALYKTLMEQLSSLDFAGRISFHFYGEPLLCKNLDLFVGMTTEYIPRARPIIYTNGDFLTEKRLQTLTELGIQKFIVTQHAGAKHKFRGVYDQ--------------------------------------LAGADKEKVVYLDHSDLVLSNRGGILDNIPANMSCMVPSNLAVV-------------------TVLGNVLPCFEDF-NQKMVMGNIGEQHISDIWHNDKFTSFRKMLKEGHRGKSDLCKNCNNVSVQTEEQYDYVL------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4M7T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -60770 for 1998 contacts (-30.4/contact) +
2D Compatibility (PS) -25396 + (NN) -7044 + (LL) 4216
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -95894.0 ( -47.99 by residue)
QMean score : 0.334
|
|
|