Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALLEIIHYPSKILRTISKEVVSFDSKLHQQLDDMHETMIASEGIGLAAIQVGLPLRMLIINLPQEDGVQHKEDCLEIINPKWIETKGSIMYREGCLSVPGFYEEVERFEKVKIEYQNRFAEVKILEASELLAVAIQHEIDHLNGVLFVDKLSILKRKKFEKELKELQKKQKHK
1BSK Chain:A ((1-163))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSE-----NRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKA--
General information:
TITO was launched using:
RESULT:
Template:
1BSK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87471 for 1262 contacts (-69.3/contact) +
2D Compatibility (PS) -17410 + (NN) -3979 + (LL) 560
1D Compatibility (HY) -13600 + (ID) 3350
Total energy: -125250.0 ( -99.25 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_1BSK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BSK-query.scw
PDB file :
Tito_Scwrl_1BSK.pdb
: