Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPRVALKSAYFQGVCDEMIVAQNIEFYSTCEHHLLPFFGNISVGYIPKEKIVGISAIAKLIEIYSKRLQIQERLTTQIAETFDEIIEPRGVIVVCEAKHLCMSMQGVQKQNAIIKTSVLRGLFKKDPKTRAEFMQLLKS
1IS7 Chain:B ((55-230))
----YSSILRSLGEDPQRQGLLKTPWRAATAMQFFTKGYQETISDVLNDAIFDEDHDEMVIVKDIDMFSMCEHHLVPFVGRVHIGYLPNKQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEALQPAGVGVVIEATHMCMVMRGVQKMNSKTVTSTMLGVFREDPKTREEFLTLIRS
General information:
TITO was launched using:
RESULT:
Template:
1IS7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85257 for 1285 contacts (-66.3/contact) +
2D Compatibility (PS) -18930 + (NN) -5156 + (LL) 508
1D Compatibility (HY) -18400 + (ID) 4050
Total energy: -131285.0 ( -102.17 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_1IS7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IS7-query.scw
PDB file :
Tito_Scwrl_1IS7.pdb
: