Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIKACYQNAQALLEGHFLLSSGFHSNYYLQSAKVLEDPKLAEQLALELAKQIQEA--HLNIECVCSPAIGGILAGYELARALGVRFIFTERV---DNTM--------------TLRRGFEVKKNEKILVCEDIITTGKSAMECAKVLEEKGAQIVAFGALANRGICKRAHSHLKAQEGACLPSHLPLFALEDFVFDMHKPSSCPLCATSVAIKPGSRGN
1G2Q Chain:A ((8-178))
QELKLALHQYPNFPSEG---------ILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGVGFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKN-AIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFL---------KGRSKL--NAPVFTLL----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1G2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103470 for 1131 contacts (-91.5/contact) +
2D Compatibility (PS) -16292 + (NN) 344 + (LL) 1972
1D Compatibility (HY) -12400 + (ID) 1500
Total energy: -131346.0 ( -116.13 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_1G2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G2Q-query.scw
PDB file :
Tito_Scwrl_1G2Q.pdb
: