Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKIELLAKFTQIALPNSHPLLKKVLNYAKKHFSQCHMLSSSLLILNDTECFKKNYLLNWVYHALECAHEKDISMHSLEEILQKSHLPIRIKIMAQNTLLEKIEVKVLTFGAEYALFITKHPIAKRFLRQKFSGCVFLETQDELHIRGDSERFWELIVTLNENRIVHNACLDFIYPNGFGKDSYTTMAERKLKECYKALGFIKHENFSEVKKRYLELAKTYHPDLCDLKEKKALYAKRFAIIQEAYSHIKKHA |
3UCS Chain:C ((3-60)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE----PDAEARFKEVAEAWEVLSDEQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UCS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29741 for 340 contacts (-87.5/contact) +
2D Compatibility (PS) -6125 + (NN) -3250 + (LL) 16492
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -26624.0 ( -78.31 by residue)
QMean score : 0.770
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