Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MGFLFEKSLMGFCAHSIKIIKVTGLILSFLAAFLVAEDTHEP--EEIKAKVAYVKI---PQLEDLENTPVYIGQTIGVTYDLLLFDAEFLEAKIKDGWDKTQIELLNKMPKWKKVEKELFRATYYYKIKGIRASIPSLEVSAFSNKDKYIDHSIAPKVALQVTDLSKNPRY----------ANVMAKDLQVVQYKTKDYDDKN----NILVMELAFKEANWEDFHVKEAIKQGFDNASLNQIKAKEGSVFYYCVLPKTL------QNLSFDYFSLSNRQ-FKTLSFSAIPTQDTTGIQSDLIPK-------NNFLVFSNVALLALCVFFLALFFIFGRKLIFLGLGILCLGFVLYNLLFTQKSALLLAHKKIRILP----TQNSTILGLSRDEMPIKILGSHDDYYKILTPHEQIGWVKKDEVK----------------- |
| 4ZFV Chain:A ((10-445)) | NVLDFTVLGLNSGTSMDGIDCALCHFYQKTP---DAPMEFELLEYGEVPLAQPIKQRVMRMILEDTTSPSELSEVNVILGEHFADAVRQFAAERNVDLSTIDAIASHGQTIWLLSMPEEGQVKSALTMA--EGAILASRTGITSIT--DFRISDQAAGRQGAPLIAFFDALLLHHPTKLRACQNIGGIANVCFIPPDVDGRRTDEYYDFDTGPGNVFIDAVVRHFTNGEQEYDKDGAMGKRGKVDQELVDDFLKMPYFQLDPPKTTGREVFRDTLAHDLIRRAEAKGLSPDDIVATTTRITAQAIVDHYRRYAPSQEIDEIFMCGGGAYNPNIVEFIQQSYPNTKIMMLDEAGVPAGAKEAITFAWQGMEALVG-----RSIPVPTRVETRQHYVLGKVSPGLNYRSVMKKGMAFGGDAQQLPWVSEMIVKKKGKVITNNWAGSHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75193 for 3103 contacts (-24.2/contact) +
2D Compatibility (PS) -36949 + (NN) 14607 + (LL) 1384
1D Compatibility (HY) -3600 + (ID) 3300
Total energy: -103051.0 ( -33.21 by residue)
QMean score : 0.092
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