Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIARFKKALISYSLGVLLVSSLLGVANASNQEIQVKDYFGEQTIKLPVSKIIYLGSFAEVPAMFNTWDRVVGISDYAFKSDIVKATLKDPERIKPMSSDHVAALNVELLKKLSPDLVVTF--VGNPKAVEHAKKFGISFL---SFQEKTIVEVMEDIDAQAKAL--EVDASKKLAKMQETLDFIKERLKNVKKKKGVELFHKANK---ISGHQALDSDILEKGGIDN-FGLKYVKFGRADISVEKIVKENPEIIFIW--WISPLSPEDVLNNPKFSTIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIIKDYYKVVFDLNDAEVEPFLWH |
| 1N2Z Chain:A ((1-245)) | -----AAPRVITLSPANTELAFAAGI-------------------------------------------TPVGVSS--YSD-------YPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDAT---SIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGI--NPPFTSGKESIQNQVLEVCGGENIFKDSRV--PWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWG----EQL----KIPVIPLTSDWFERA-------------------SPRIILAAQQLCNALSQVD---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73577 for 1843 contacts (-39.9/contact) +
2D Compatibility (PS) -25197 + (NN) -10057 + (LL) 8636
1D Compatibility (HY) -6800 + (ID) 2050
Total energy: -109045.0 ( -59.17 by residue)
QMean score : 0.482
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