Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LATGIGTAKMILCGEHAVVYGEPAISVPFTQAVVTTNVET-SI-KTKFSSAFFSGD----L-------DDMPDFLAGIKALVVDVLNEIGN--GECVSIHVVSGVPIGRGLGSSAAVATSIARGLYKYFNQELDSKKLLAIVNAAEKIAHGNASGVDAITVVSEKPVWYERDR--KLE--IMHFPKKITFVVADTGVP-SETRDAVKDVQVLYKENQVEIGKIIHQLGDISREIKTHLEGDADTVKIGAAMNKAQSYLETLTVSDSSLEKLIKVARSNGADGAKLTGGGRGGCIIAVAKNQEIAEQITKALHNAGAAQEWIFTIGEGSYESDSHRTHECGAN |
1KKH Chain:A ((6-310)) | -MIIETPSKVILFGEHAVVYGYRAISMAIDLTS-TIEIKETQEDEIILNLNDLNKSLGLNLNEIKNINPNNFGDFKYCLCAIKNTLDYLNIEPKTGFKINISSKIPISCGLGSSASITIGTIKAVSGFYNKELKDDEIAKLGYMVEKEIQGKASITDTSTITYKGILEIKNNKFRKIKGEFEEFLKNCKFLIVYAEKRKKKTAELVNEVAKIENK-----DEIFKEI---DKVIDEALK-IKNKEDFGKLMTKNHELLKKLNISTPKLDRIVDIGNRFG-FGAKLTGAGGGGCVIILVNEEK-EKELLKELNKEDVRI------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121085 for 2463 contacts (-49.2/contact) +
2D Compatibility (PS) -31022 + (NN) -13727 + (LL) 1980
1D Compatibility (HY) -16800 + (ID) 3400
Total energy: -184054.0 ( -74.73 by residue)
QMean score : 0.506
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