Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSRKKGIILVLSVILIFSIGLLVNNLMTNNK-DTAKPKKKTVAAVKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVLAEKGMDYPFNNVREELKSSDYTFVDLETAITTRTKKVPYQEFWIKSDPSSLTALKNAGVDMVNISNNHILDYYEDGLLDTTAALRANNLAYVGAGKNEDEAYQLKVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGYDLNLVEEKIKEERAKNKDIDYMVVYFHWGVEK-----TNTPVDYQTQYVKKLVDDNLVDAIVASHPHWLQGFEVYKDVPIAYSLGNFLFPDYVSGHSAETGIYKLNFDQGKVTAHFDPGIISGNQINMLEGSSKTAQLNYLQSISPNATINSNGDISAK
2DXN Chain:A ((1-271))-----------MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPD------AVVVSGD----------IVNCGRPEEYQVARQILG--------------------------------------SLNYPLYLIPGNH----------DDKALFLEYLQPLCPQLGSDANNMRCAV-DDFATRLLFI-------------DSSRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNH-SLTMTQYRQALISTLPGTVHQ-------------VPYCHEDTDPYYDLSP---ASCLMHRQVGEQWVSYQHSLAHYAGPWLYDENISCPT-


General information:
TITO was launched using:
RESULT:

Template: 2DXN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10473 for 2166 contacts (-4.8/contact) +
2D Compatibility (PS) -28709 + (NN) -13542 + (LL) 6740
1D Compatibility (HY) -4400 + (ID) 1650
Total energy: -52034.0 ( -24.02 by residue)
QMean score : 0.299

(partial model without unconserved sides chains):
PDB file : Tito_2DXN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DXN-query.scw
PDB file : Tito_Scwrl_2DXN.pdb: