Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTFFSKWGKWILVLGLVFSVFSVSTAGQAAAKETVINKQMVTTASLNVRSTNSTSGKVIGWLKNNTKFKAIAKTSNNWYRFSFKGKNGYVSGKYVKAATATPTPKPPTPKIVQMNVPLIVQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKRHKSNPNYGFVGNPFSKSGWTIYPPALVNQVKKYTGSAKNMTGTNLAGIKNQLNKKRPVVAWVSKFHGFSVHAITITGYDKNNFYYNDSWSGQKNARISQSYFNTCWSKQAKRAISY |
| 3K8U Chain:A ((5-141)) | ---------------------------------------------------------------------------------------------------------------------HYKLVPQIDTRDCGPAVLASVAKHYGSNYSIAYLRELSK--------------TNKQGTTALGIVEAAKKLGFETRSIKADMTLFDYNDLTY----PFIVHVIK-GKRLQHYYVVYGSQNNQLIIGDPDPSVKVTRMSKERFQSEWTGLAIFLAPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43651 for 1100 contacts (-39.7/contact) +
2D Compatibility (PS) -14914 + (NN) -6069 + (LL) 7128
1D Compatibility (HY) 1200 + (ID) 1150
Total energy: -57456.0 ( -52.23 by residue)
QMean score : 0.400
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