Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MKKLNELSKSDLLLIFQALSDPIRLDIFLCLLKSKEKRFSGTTYNI--SKSTMSHHIKLLKEAKLINLRKEGTTHIYSV-NQELVSLISHFFEECGEKDE
3CUO Chain:A ((1-98))
MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYC----
General information:
TITO was launched using:
RESULT:
Template:
3CUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54481 for 581 contacts (-93.8/contact) +
2D Compatibility (PS) -9801 + (NN) -4844 + (LL) 196
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -71930.0 ( -123.80 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_3CUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CUO-query.scw
PDB file :
Tito_Scwrl_3CUO.pdb
: