Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MLHIEAQITVKKEQTEAFLQAAKEVIAASRAEAGNHGYELVQSTENETVFYMLEKWADMDAIQQHNDSEHFKKFQKAAADFVAKELEISVLTPLAR--
1Y0H Chain:A ((1-101))
GMTSPVAVIARFMPRPDARSALRALLDAMITPTRAEDGCRSYDLYESADGGE-LVLFERYRSRIALDEHRGSPHYLNYRAQVGELLTRPVAVTVLAPLDEAS
General information:
TITO was launched using:
RESULT:
Template:
1Y0H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32528 for 634 contacts (-51.3/contact) +
2D Compatibility (PS) -10423 + (NN) -2420 + (LL) 192
1D Compatibility (HY) -8000 + (ID) 950
Total energy: -54129.0 ( -85.38 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_1Y0H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y0H-query.scw
PDB file :
Tito_Scwrl_1Y0H.pdb
: