Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYEKALAFIKSNSTLEQEEGTEVIFKQAQETARGNLDPFLLKDLKQHLGGTNDAIKEAPQEIQMPDFSNLEIATAAALQMRATMGSPNIDLSNGVTTEYRVVEGDYG--DIPVRIYRHEEATKPVPAFIFYHGGGFVGGTPAVVENFCKGIAEKLPAVVINVDYHLAPEFPAPAAPKDCYRVLEWVVEQSNELGIDASKIGVSGDSAGGTLAAAVSYMDYEAETNYVGFQALLYPALTLVDEDNDKYQWDISKFGASEDTLPLVAPGIIGMNSSGELLRKAYVRDEN------PAAPIYSPLSAVDKSIYPPTLIASAEFDALRAFADVFAKELRASGVQTKAIVYQGMCHAFIDKYGI---FPQAEDVADEIVQMMKEIF |
| 1LZL Chain:A ((47-318)) | ---------------------------------------------------------------------------------------------DGVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLE-----TVSMTNFVDTP--------LWHR-P-NAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LZL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164103 for 2372 contacts (-69.2/contact) +
2D Compatibility (PS) -28128 + (NN) -13899 + (LL) 7336
1D Compatibility (HY) -6800 + (ID) 3850
Total energy: -209444.0 ( -88.30 by residue)
QMean score : 0.566
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