Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------MDISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLVRLKTATT-ILAPIDFFDDIVLLNATREMQDFVAETAIKQINQL---GGRFSISINIPAHYVASSTYMTFLHDYVKEHLKYPECLEIEIIERGEITELAIADKNLRKIKDLGVKVSMDDFGKGYSSLAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVEKLREMKVDYFQGYYFSRPLPMEEIKQKYSIV------ |
| 3SY8 Chain:D ((3-398)) | DLNVLVLQRLVAVTALKKVVPGSILEAADGKEAVAILEDIAICDLQMSGMDGLAFLRHASLSGKVHSVILSSEVDPILRQATISMIECLGLNFLGDERITALLTRYNAREVAELPSVADVVRGLDNGEFEAYYQPKVALDGGGLIGAEVLARWNHPHLGVLPPSHFLYVMETYNLVDKLFWQLFSQGLATRRKLAQLGQPINLAFNVHPSQLGSRALAENISALLTEFHLPPSSVMFEITETGLISAPASSLENLVRLWIMGCGLAMDDFGAGYSSLDRLCEFPFSQIKLDRTFVQKMKTQPRSCAVISSVVALAQALGISLVVEGVESDEQRVRLIELGCSIAQGYLFARPMPEQHFLDYCSGSLEHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123203 for 2000 contacts (-61.6/contact) +
2D Compatibility (PS) -27140 + (NN) -11712 + (LL) 0
1D Compatibility (HY) -14800 + (ID) 3500
Total energy: -180355.0 ( -90.18 by residue)
QMean score : 0.517
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