Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVR--ISVRRLVEFVRRSGSIDNRMTSSDRALEGTKIHQLLQKEAGEEYAAEVRLNLDRIVDGIAFSLDGRADGIIN-GRMIDEIKTTE--TPMDEITENFRPLHWAQ--LICYGFMLAEKSDLAEVTLQLTYYQVVDKEVKQF-----QRVMSREELSVFVDDLLSQYAIWAKASAAWEMKRNKTIQELTFPYDSYRSGQRELAIA-VYRTISSEESLFCEAPT-GIGKTMSTLFPGIKAMGEGKTDKLFYFTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKICFLDERKCEPDHCQFARGYYDRLNEALFDMLQSEEAITRQVVESYARKYTLCPFELSLDVALFCDVIVCDYNYLFDPVVYLKRFFAEGPGKYTFLVDEVHNLVDRARSMYSATLKKSAVMQVKRGLDAKNNKRLLNAINV-MNKDMIALNKKLKDLDGTIYVQK-NELIDWNESVLKFTFVAKEWLPQNTQSEIQADVLELYFESLRYVAIADFYDDRYVTQVTKSHGDLEIKQVCLDPSFLLSERLKLGSSSVLFSATLRPIDYYTNLLGGQEDTSRMIFSSPFKQKNMHLLVADYISTKYQMRENSMEAVVDALYALVSGENGNYLFFFPSFLYLQKVYDLFKEKYPNIRLQKQETAMDEERREHFLERFQAENVETLIGFCVLGGVFSEGVDLRGNRLVGAAVVGVGLAQLNHESDLIKDYYNETIGRGFDYAYQIPGMNKVLQAVGRV--IRGESDRGVVLLIEERFSADRYRALFPTH----WNHAKTVKSTDDISREVA---GFWRNS |
| 4IUW Chain:A ((4-633)) | LPRIQDDLYLAVNGEWQAKTPIPPDKSVVSADSNLTDDIRQKLVADLSTMTKTAKTLPLQYAARLFAKANDQTRRQQLGIEPVRDRISFLMALTTLDQFRSAMPKLVADQYVLPISPYVDADMHDAEHNILNLGGPDTILPDAAMYNQEDAENAADLAAWSQMAAAMLAA----VGFSQTDQTAYVEAAKRFDRRLADYVPANVDLAVDSTYDNPLSWQAFEDAAGYLGIPQAFATYMPQTPAKVNAVVPAYLPHLSKLLTPDNYSEWHAWMVINELLTCATYLS-------DDLRQLAGQYDRFLAGQPEASSWTKHAFGIANEYFDDVIGQYYGQTY--FGADAKADVTAMVKQILAQYRVQLENNTWLS------------------------PATKQKAMRKLATMQVKMGYPARLF-SLYDHLSVDVDDDLLTAILKLSAQTQAFWFKQLGQTVDRNQWNM--------------------------------------------------------------PGHLVNASYDPLKNDITFPAGILQPPYYSLKWTRAENLGGT--GATIGHEISHSF--DNNGALYD-------------------EYGNLHNWWT----------------------PADKQAFDQLVKAMAAQFDGRDYE---------GVKVNGTLTVSENMADNAGMDVALALLGDQPD-------------------VKDLQAFFITYARSWATKMRPERAKTVLRQDVHAPATLRVNVPVQNFPAWYQAFNVQPQDGMYRQPQKRLTIWHQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36326 for 5098 contacts (-7.1/contact) +
2D Compatibility (PS) -62786 + (NN) -7578 + (LL) 14556
1D Compatibility (HY) -8800 + (ID) 5000
Total energy: -105934.0 ( -20.78 by residue)
QMean score : 0.186
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