Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDGVPQTDFGYYDNMDVHYTWSIPNSTNVKAGDTMDFTLPSQLALATDLAFDVKDSKGQVVGTATVKKATNQVTLVFSDYVEKHSDVKGELDFWTAFNQKVITGNETVDLVFPLENGTTVIDVEVGEKTPVSPTETLFKYGWVDASNPSLIHWVVRVNYAKV------NIPNAVFTDIIGAKQTLNFDSIKAFHGTYSADRVFTAGAPISSTNFS----ATSDGFSVALGN--------------LTDSVQISYTTTTTDG-GKSTQYDNTAKLAGTDFVTKQTST----WTP--ASGGGGEGGGTTGSVTLTKEDAK---TKATLEGAEFKLVDSKGTVL---------------------QENITTNASGQLSIADLKF---------------DTYQLIETKAPTGYKLDTTPVEFTIGENNQAITVTKENTLNTGSVELTKLDAATKATLAGATFELQDKEGNTLQTDLKTDENGVLKVTDLVPGSYQFVETSAPTGYKLDNSPVSFEVIAGETDQVVKVTKENTLEVGSVELTKLDSATKATLAGATFELQDKEGNTLQTDLKTDENGVLKVTDLVPGSYQFVETSAPTGYKLDNSPVSFEVVAGETDQVVKVTKENTLEVGSVELTKLDSATKATLAGATFELQDKEGNTLQTGLTTDENGVLKVTDLVPGTYQFVETKAPIGYELDTTPVSFEIVAGETDPIVKVTKENTLVPPTPVPPTPVPPTPVPPTPVPPTPLPPVPYEPTVPPTKPEVPVTPKKTENSEDSPKTTPIRITQSLPKTGDTNSFAGLGVILIALSLSGLLLKRK |
| 3UXF Chain:A ((196-471)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSGRDITYTITTSIPKVDYPGGARIKRYEVVDRLDKRIKKEALTPVVKIVGQN-EVTLAET---TDYTLITAEGKDHNWATIQLTEEGRRKASEARYNGNGETKLQVTLNAKFDAAVNLEGDLSNTAGLIPNDSPNFTWDPNNPGTTTDIPGIPTTPVLSKYGKVILTKTGTDDLADKTKYNGAQFQVYECTKTASGATLRDSDPSTQTVDPLTIGGEKTFTTAGQGTVEINYLRANDYVNGAKKDQLTDEDYYCLVETKAPEGYNLQADPLPFRVLAEK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UXF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4963 for 1355 contacts (-3.7/contact) +
2D Compatibility (PS) -22252 + (NN) -4474 + (LL) 31816
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: -8323.0 ( -6.14 by residue)
QMean score : 0.394
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