Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKNWYVVHTYSGYENKVKANLEKRVESMGMSDKIFRVIVPEEEETEVKNGKTKTIKRKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTPLLPEEADRILKSMGMVEKRAEADFEIGETVMVKEGPFADFSGKVDEMDNDKGKAKVMVNMFGRETPVEVDFNQIEKL
3EWG Chain:A ((1-80))
---MIFAVRTMVGQEKNIAGLMASRAEKEQL--DVYSILASES-----------------LKGYVLVEAETKGDVEELIKGMPRVRGIVPGTIAIEEIEPLL---------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EWG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61207 for 567 contacts (-107.9/contact) +
2D Compatibility (PS) -9087 + (NN) -7949 + (LL) 6524
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -77969.0 ( -137.51 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_3EWG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EWG-query.scw
PDB file :
Tito_Scwrl_3EWG.pdb
: