Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LLVEELKTKYLVKDICQILQVPLSTYYRWKKKDFSQSSLEKKIGQLCKAYQFTYGYRKIAALMKQEEQVGIN---KVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDITYLYFGDCRLYLS-SIMDLYNGE-----IVAYSIGEKQDTELVLDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA |
| 4HHT Chain:A ((1-229)) | ------------------------GIDELYKKEFGIVAGVDEASRGCLA-----GPVVAAAVVLEKEIEGINDSRLLDEIMEKAAVGIGIASPEEIDLYNIFNATKLAMNRALEN------LSVKPSFVLVDGKGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMY--PQFSFHKHKG--YATKEHLNEIRKNGV-----LPIHRLSFEPVLELLTDDLLREFFEK---------------GLISENRFERILNLLGARKSVVFRKER- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21944 for 1694 contacts (13.0/contact) +
2D Compatibility (PS) -22082 + (NN) 926 + (LL) 6024
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: -3438.0 ( -2.03 by residue)
QMean score : 0.033
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