Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKTWEEFLKQEAKQPYFIELMEAVKDARAKGNVYPSEEDMFSCFRLCPYNQVKVVILGQDPYHGPGQAHGLSFSVQKDVRIPPSLRNIYKELKTDL-DIEPADHGYLAKWAEQGVLLMNTSWSVEEGKAGSHKKLGWATFTDHVLEELNNYDKPLVFILWGNHAIKAASGITNPQ-HLIIKGVHPSPLAASRGFFGS-KPFSKTNAFLEEHERKPIDWDLNEQ
2C53 Chain:A ((32-244))
----WRPLMEPELANPLTAHLLAEYNRRCQTEEVLPPREDVFSWTRYCTPDEVRVVIIGQNPYHHPGQAHGLAFSVRANVPPPPSLRNVLAAVKNCYPEARMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGLVFMLWGTHAQNAIR--PDPRVHCVLKFSNPSPL--SKVPFGTCQHFLVANRYLETRSISPIDWSV---
General information:
TITO was launched using:
RESULT:
Template:
2C53.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108942 for 1675 contacts (-65.0/contact) +
2D Compatibility (PS) -22768 + (NN) -12178 + (LL) 980
1D Compatibility (HY) -20400 + (ID) 4400
Total energy: -167708.0 ( -100.12 by residue)
QMean score : 0.671
(partial model without unconserved sides chains):
PDB file :
Tito_2C53.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C53-query.scw
PDB file :
Tito_Scwrl_2C53.pdb
: