Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQYKIKEMPLEELEPKVVEGLLEHKERLG-YNIPKK-DTEYIGFAALSEVGEMVGGVTAKIS-YGELHVSLLSVDPSTQGSGVGTELMAQIERYGRANSCHHISLTTFSYQAPEFYRKCGFTELGRVKDFPIKGEEKYFFIKYL
3BLN Chain:A ((1-141))
GMKNVTKASIDDLDSIVHIDIDVIGNDSRRNYIKHSIDE-GRCVIV-KEDNSISGFLTYDTNFFDCTFLSLIIVSPTKRRRGYASSLLSYMLSHSPTQKIF-SSTNESNESMQKVFNANGFIRSGIVENLDEGDPEIIFYTKKL
General information:
TITO was launched using:
RESULT:
Template:
3BLN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39404 for 995 contacts (-39.6/contact) +
2D Compatibility (PS) -14282 + (NN) 2254 + (LL) 324
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -54208.0 ( -54.48 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_3BLN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BLN-query.scw
PDB file :
Tito_Scwrl_3BLN.pdb
: