Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MIEKTIMERRSIKKANDEPISRETVNTILEQAAYAPFHSKVEPWNVYVLHTLAEKERYIEKIIEFNEREQGVSFSEAEIADLKA----GYAKKIITPPYLLIVTTNII---GHGKKDFESIGATSAFIQNIQLLGWEAGIGMIWRSNRFIFDAKFADDLGIPAEQKIVGTLHLTSLAEVPEAKPRRPLNEWVKNLADL-- |
| 3GFD Chain:A ((34-255)) | SVEHIPFSHTRYPEQEMRMRSQEFYELLNKRRSVRFISSEHVPMEVIENVIKAAGTAPSGAHTEPWTFVVVKDPDMKHKIREIIEEEEEINYMKRMGKRWVTDLKKLRTNWIKEYLDTAPVLILIFKQVHGFNGKKKVHYYNEISVSIACGLLLAALQNAGLVTVTTTP-LNCGPRLRVLLGRPSHEKLLVLLPVGYPSRDAT-VPDLKRKALDQIMVTVHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56491 for 1341 contacts (-42.1/contact) +
2D Compatibility (PS) -20361 + (NN) -7869 + (LL) 244
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -92577.0 ( -69.04 by residue)
QMean score : 0.574
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