Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQSITANDLEQDLKKVPHNILDVRDADAFVEGHIPDAINIPINELPEKLATLDKEKAYTIICYAGGRSERASQFLAAEGFD-VTNVMGGMGAFHGTVTN
3TP9 Chain:A ((374-470))
--ANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLPQAHHIPLSKLAAHIHDVPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVGGYEAWRGKGF-
General information:
TITO was launched using:
RESULT:
Template:
3TP9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58925 for 722 contacts (-81.6/contact) +
2D Compatibility (PS) -10607 + (NN) -4585 + (LL) 220
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -83297.0 ( -115.37 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_3TP9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TP9-query.scw
PDB file :
Tito_Scwrl_3TP9.pdb
: