Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAYPQFDVILKALNLSSVGVIITDPEQKDNPIIFVNTGFENITGYAKEEALGSNCHFLQGDDTDKEEVAKIRHAINEKSTANVLLKNYRKDGTSFMNELTIEPIYDDHEHL-YFVGIQKDVTTEHDYQLELEKSLTEIEKLSTPIVPIKENICVLPLIGSLTHDRFQHMSEYVSEYMDHGKEDYLIMDLSGLAEFNEDAVMNLVKFHGFMKLTGVELIITGISPKFAMTLIRYEENLASLTTYSTIKEALQFY |
| 4EER Chain:A ((11-110)) | ---------------------VISDPRLPDNPIIFASDSFLELTEYSREEILGRNARFLQGPETDQATVQKIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLD------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28952 for 648 contacts (-44.7/contact) +
2D Compatibility (PS) -10622 + (NN) -3427 + (LL) 12584
1D Compatibility (HY) -9200 + (ID) 2250
Total energy: -41867.0 ( -64.61 by residue)
QMean score : 0.565
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